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eRAM

encyclopedia of Rare Disease Annotation for Precision Medicine



   vesicoureteral reflux
  

Disease ID 462
Disease vesicoureteral reflux
Definition
Retrograde flow of urine from the URINARY BLADDER into the URETER. This is often due to incompetence of the vesicoureteral valve leading to ascending bacterial infection into the KIDNEY.
Synonym
reflux vesicoureteral
reflux vesicoureteric
reflux, vesico-ureteral
reflux, vesicoureteral
ureteral reflux
ureteric reflux
vesico ureteral reflux
vesico-ureteral reflux
vesico-ureteral reflux [disease/finding]
vesico-ureteric reflux
vesico-ureteric reflux (finding)
vesicoureteral reflux 1
vesicoureteric reflux
vesicoureteric reflux (disorder)
vur
vur - vesicoureteral reflux
vur - vesicoureteric reflux
vur1
OMIM
DOID
UMLS
C0042580
MeSH
SNOMED-CT
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:25)
C0020295  |  hydronephrosis  |  5
C0034186  |  pyelonephritis  |  3
C0005697  |  neurogenic bladder  |  3
C0041956  |  ureteral obstruction  |  2
C0022658  |  renal disease  |  2
C0022661  |  end-stage renal disease  |  2
C0020538  |  hypertension  |  2
C0345335  |  multicystic dysplastic kidney  |  1
C0010692  |  cystitis  |  1
C0178664  |  glomerulosclerosis  |  1
C0033687  |  proteinuria  |  1
C0156273  |  bladder diverticula  |  1
C0027719  |  nephrosclerosis  |  1
C0151740  |  intracranial hypertension  |  1
C0156273  |  bladder diverticulum  |  1
C0041952  |  ureteral stone  |  1
C0041960  |  ureterocele  |  1
C0009806  |  constipation  |  1
C0022658  |  nephropathy  |  1
C0005411  |  biliary atresia  |  1
C0034359  |  pyuria  |  1
C0022661  |  chronic kidney disease  |  1
C0282488  |  interstitial cystitis  |  1
C0520575  |  acute pyelonephritis  |  1
C0033845  |  idiopathic intracranial hypertension  |  1
Curated Gene(Waiting for update.)
Inferring Gene
Entrez_id | Symbol | Resource(Total Genes:13)
1636  |  ACE  |  CIPHER
185  |  AGTR1  |  CIPHER
186  |  AGTR2  |  CIPHER
3816  |  KLK1  |  CIPHER
7040  |  TGFB1  |  CIPHER
11045  |  UPK1A  |  CIPHER
6928  |  HNF1B  |  CIPHER
5076  |  PAX2  |  CIPHER
5979  |  RET  |  CIPHER
6092  |  ROBO2  |  CIPHER
9353  |  SLIT2  |  CIPHER
7380  |  UPK3A  |  CIPHER
54113  |  VUR  |  CTD_human
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:83)
176  |  ACAN  |  1.09  |  DISEASES
55811  |  ADCY10  |  3.107  |  DISEASES
183  |  AGT  |  1.892  |  DISEASES
186  |  AGTR2  |  3.116  |  DISEASES
8905  |  AP1S2  |  1.454  |  DISEASES
60489  |  APOBEC3G  |  1.379  |  DISEASES
170302  |  ARX  |  1.465  |  DISEASES
54829  |  ASPN  |  1.268  |  DISEASES
567  |  B2M  |  2.837  |  DISEASES
586  |  BCAT1  |  1.803  |  DISEASES
80114  |  BICC1  |  2.098  |  DISEASES
127795  |  C1orf87  |  3.125  |  DISEASES
22900  |  CARD8  |  1.615  |  DISEASES
911  |  CD1C  |  1.497  |  DISEASES
988  |  CDC5L  |  2.095  |  DISEASES
9557  |  CHD1L  |  1.374  |  DISEASES
55636  |  CHD7  |  2.332  |  DISEASES
79827  |  CLMP  |  1.896  |  DISEASES
64084  |  CLSTN2  |  1.829  |  DISEASES
1369  |  CPN1  |  1.142  |  DISEASES
1471  |  CST3  |  2.356  |  DISEASES
10106  |  CTDSP2  |  2.222  |  DISEASES
9547  |  CXCL14  |  1.052  |  DISEASES
25778  |  DSTYK  |  3.441  |  DISEASES
2018  |  EMX2  |  2.919  |  DISEASES
2138  |  EYA1  |  2.621  |  DISEASES
2152  |  F3  |  2.346  |  DISEASES
389549  |  FEZF1  |  1.743  |  DISEASES
2253  |  FGF8  |  1.869  |  DISEASES
2263  |  FGFR2  |  2.347  |  DISEASES
2317  |  FLNB  |  1.353  |  DISEASES
2303  |  FOXC2  |  1.081  |  DISEASES
2300  |  FOXL1  |  2.027  |  DISEASES
2625  |  GATA3  |  1.483  |  DISEASES
2668  |  GDNF  |  1.943  |  DISEASES
2674  |  GFRA1  |  1.332  |  DISEASES
2737  |  GLI3  |  1.421  |  DISEASES
11146  |  GLMN  |  2.197  |  DISEASES
2739  |  GLO1  |  1.103  |  DISEASES
2980  |  GUCA2A  |  1.782  |  DISEASES
26762  |  HAVCR1  |  1.654  |  DISEASES
3055  |  HCK  |  1.345  |  DISEASES
60495  |  HPSE2  |  2.161  |  DISEASES
3400  |  ID4  |  1.217  |  DISEASES
29949  |  IL19  |  1.403  |  DISEASES
9807  |  IP6K1  |  2.474  |  DISEASES
51447  |  IP6K2  |  2.49  |  DISEASES
102723508  |  KANTR  |  2.023  |  DISEASES
84148  |  KAT8  |  1.508  |  DISEASES
9851  |  KIAA0753  |  1.68  |  DISEASES
54900  |  LAX1  |  2.415  |  DISEASES
9860  |  LRIG2  |  3.155  |  DISEASES
90550  |  MCU  |  5.699  |  DISEASES
10724  |  MGEA5  |  3.486  |  DISEASES
399687  |  MYO18A  |  1.286  |  DISEASES
64324  |  NSD1  |  1.125  |  DISEASES
5021  |  OXTR  |  1.02  |  DISEASES
5064  |  PALM  |  3.384  |  DISEASES
5076  |  PAX2  |  4.624  |  DISEASES
79156  |  PLEKHF1  |  3.292  |  DISEASES
64901  |  RANBP17  |  2.803  |  DISEASES
2889  |  RAPGEF1  |  1.208  |  DISEASES
5979  |  RET  |  2.042  |  DISEASES
6092  |  ROBO2  |  5.216  |  DISEASES
6139  |  RPL17  |  3.405  |  DISEASES
6297  |  SALL2  |  2.142  |  DISEASES
8910  |  SGCE  |  1.185  |  DISEASES
25970  |  SH2B1  |  1.426  |  DISEASES
9353  |  SLIT2  |  3.252  |  DISEASES
6586  |  SLIT3  |  3.119  |  DISEASES
692233  |  SNORD117  |  2.894  |  DISEASES
6082  |  SNORD20  |  2.574  |  DISEASES
26774  |  SNORD80  |  2.67  |  DISEASES
10252  |  SPRY1  |  2.307  |  DISEASES
9220  |  TIAF1  |  1.525  |  DISEASES
10333  |  TLR6  |  1.096  |  DISEASES
7124  |  TNF  |  1.004  |  DISEASES
7148  |  TNXB  |  3.091  |  DISEASES
11277  |  TREX1  |  1.161  |  DISEASES
92181  |  UBTD2  |  3.491  |  DISEASES
7422  |  VEGFA  |  1.214  |  DISEASES
7481  |  WNT11  |  1.532  |  DISEASES
57623  |  ZFAT  |  2.588  |  DISEASES
Locus(Waiting for update.)
Disease ID 462
Disease vesicoureteral reflux
Integrated Phenotype
HPO | Name(Total Integrated Phenotypes:2)
HP:0000924  |  Abnormality of the skeletal system
HP:0000076  |  Vesicoureteric reflux
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:37)
HP:0000010  |  Frequent urinary tract infections  |  26
HP:0100699  |  Scarring  |  9
HP:0000126  |  Hydronephrosis  |  5
HP:0001382  |  Hyperextensible joints  |  4
HP:0000011  |  Neurogenic bladder  |  3
HP:0003774  |  End-stage renal failure  |  3
HP:0010481  |  Urethral valve  |  3
HP:0012330  |  Pyelonephritis  |  3
HP:0010957  |  Congenital posterior urethral valve  |  3
HP:0000015  |  Bladder diverticula  |  2
HP:0000805  |  Enuresis  |  2
HP:0010677  |  Enuresis nocturna  |  2
HP:0000822  |  Hypertension  |  2
HP:0006000  |  Ureteral obstruction  |  2
HP:0000073  |  Ureteral duplication  |  2
HP:0000086  |  Ectopic kidney  |  2
HP:0000003  |  Multicystic kidney dysplasia  |  1
HP:0000093  |  Proteinuria  |  1
HP:0008705  |  Ureteral triplication  |  1
HP:0012085  |  High urine neutrophil count  |  1
HP:0010867  |  Dyssynergia  |  1
HP:0000096  |  Glomerulosclerosis  |  1
HP:0000083  |  Renal insufficiency  |  1
HP:0030037  |  Bifid ureter  |  1
HP:0000072  |  Megaureter  |  1
HP:0002150  |  Hypercalcinuria  |  1
HP:0012585  |  Renal atrophy  |  1
HP:0002516  |  Intracranial pressure elevation  |  1
HP:0000070  |  Ureterocele  |  1
HP:0012622  |  Chronic kidney disease  |  1
HP:0009741  |  Thickening of kidney artiries  |  1
HP:0005912  |  Biliary duct atresia  |  1
HP:0002019  |  Dyschezia  |  1
HP:0000112  |  Nephropathy  |  1
HP:0000081  |  Double urinary collecting systems on intravenous pyelography  |  1
HP:0000089  |  Small kidneys  |  1
HP:0004736  |  Crossed fused renal ectopia  |  1
Disease ID 462
Disease vesicoureteral reflux
Manually Symptom
UMLS  | Name(Total Manually Symptoms:19)
C2632116  |  stenosis
C1963154  |  renal failure
C1963087  |  constipation
C1567741  |  hereditary nephritis
C0403477  |  medullary nephrocalcinosis
C0403447  |  chronic kidney disease
C0403389  |  chronic obstructive pyelonephritis
C0282488  |  interstitial cystitis
C0262655  |  recurrent urinary tract infection
C0232495  |  lower abdominal pain
C0151465  |  renal abscess
C0085697  |  chronic pyelonephritis
C0042029  |  urinary tract infections
C0042029  |  urinary tract infection
C0034186  |  pyelonephritis
C0022661  |  end-stage renal disease
C0022661  |  end stage renal disease
C0022658  |  renal disease
C0000737  |  abdominal pain
Text Mined Symptom
UMLS | Name | Sentences' Count(Total Symptoms:9)
C0042029  |  urinary tract infection  |  17
C0042029  |  urinary tract infections  |  4
C0262655  |  recurrent urinary tract infection  |  3
C0034186  |  pyelonephritis  |  2
C0022658  |  renal disease  |  1
C0282488  |  interstitial cystitis  |  1
C0022661  |  end-stage renal disease  |  1
C0022661  |  chronic kidney disease  |  1
C0035078  |  renal failure  |  1
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:4)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs3804099234840497097TLR2umls:C0042580BeFreeFurther genotype pattern frequency analysis in TLR-2 SNPs (rs3804099 and rs3804100) showed significantly reduced occurrence of the rare allele homozygote (CC+CC) in the no-VUR subgroup of APN and ALN cases.0.0002714422013TLR24153703504TC
rs3804100234840497097TLR2umls:C0042580BeFreeFurther genotype pattern frequency analysis in TLR-2 SNPs (rs3804099 and rs3804100) showed significantly reduced occurrence of the rare allele homozygote (CC+CC) in the no-VUR subgroup of APN and ALN cases.0.0002714422013TLR24153704257TC
rs4073210422303576CXCL8umls:C0042580BeFreeFollowing the elimination of vesicoureteral reflux, which is a significant risk factor for severe parenchymal infection, a single SNP in IL-8 (rs4073) was found to be associated with clinically severe ALN.0.0008143262011CXCL8473740307AT
rs5443153374652784GNB3umls:C0042580BeFreeThis result suggests that the C825T polymorphism of the GNB3 gene might be associated with the development of VUR.0.0056342662004GNB3;CDCA3126845711CT
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:2)
HP ID HP Name MP ID MP Name Annotation
HP:0000076Vesicoureteral refluxMP:0001948vesicoureteral refluxthe retrograde flow of urine from the bladder into the ureters and kidneys
HP:0000924Abnormality of the skeletal systemMP:0013283failure of ventral body wall closurefailure of the lateral body wall folds (a combination of mesoderm and ectoderm arising on each side of the embryo) to progress ventrally and meet in the midline and/or fuse to close the ventral body wall; normally, this closure is aided by growth of the h
Mapped by homologous gene(Total Items:2)
HP ID HP Name MP ID MP Name Annotation
HP:0000076Vesicoureteral refluxMP:0014155absent olfactory epitheliumabsence of the epithelial cells that line the interior of the nose
HP:0000924Abnormality of the skeletal systemMP:0014071increased cardiac muscle glycogen levelgreater than the normal concentration of a readily converted carbohydrate reserve in heart muscle
Disease ID 462
Disease vesicoureteral reflux
Case(Waiting for update.)